Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRK2Q86Y07 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.37■■□□□ 1.17
VRK2Q86Y07 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
VRK2Q86Y07 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VRK2Q86Y07 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRK2Q86Y07 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRK2Q86Y07 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VRK2Q86Y07 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VRK2Q86Y07 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VRK2Q86Y07 AC096887.2-201ENST00000623443 1957 ntBASIC22.35■■□□□ 1.17
VRK2Q86Y07 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
VRK2Q86Y07 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.35■■□□□ 1.17
VRK2Q86Y07 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 MIR639-201ENST00000384974 98 ntBASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
VRK2Q86Y07 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
VRK2Q86Y07 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRK2Q86Y07 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRK2Q86Y07 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VRK2Q86Y07 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.33■■□□□ 1.17
VRK2Q86Y07 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VRK2Q86Y07 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VRK2Q86Y07 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRK2Q86Y07 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
VRK2Q86Y07 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
VRK2Q86Y07 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
VRK2Q86Y07 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VRK2Q86Y07 AL157400.5-201ENST00000507624 621 ntBASIC22.32■■□□□ 1.16
VRK2Q86Y07 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VRK2Q86Y07 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VRK2Q86Y07 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRK2Q86Y07 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
VRK2Q86Y07 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VRK2Q86Y07 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VRK2Q86Y07 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRK2Q86Y07 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRK2Q86Y07 AC060814.1-201ENST00000554326 538 ntBASIC22.3■■□□□ 1.16
VRK2Q86Y07 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VRK2Q86Y07 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VRK2Q86Y07 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRK2Q86Y07 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.29■■□□□ 1.16
VRK2Q86Y07 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRK2Q86Y07 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.29■■□□□ 1.16
VRK2Q86Y07 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.29■■□□□ 1.16
VRK2Q86Y07 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRK2Q86Y07 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
VRK2Q86Y07 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRK2Q86Y07 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VRK2Q86Y07 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRK2Q86Y07 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.28■■□□□ 1.16
VRK2Q86Y07 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
VRK2Q86Y07 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.27■■□□□ 1.16
VRK2Q86Y07 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRK2Q86Y07 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.26■■□□□ 1.15
VRK2Q86Y07 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.26■■□□□ 1.15
VRK2Q86Y07 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRK2Q86Y07 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
VRK2Q86Y07 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.26■■□□□ 1.15
VRK2Q86Y07 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VRK2Q86Y07 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VRK2Q86Y07 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
VRK2Q86Y07 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VRK2Q86Y07 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.24■■□□□ 1.15
VRK2Q86Y07 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.24■■□□□ 1.15
VRK2Q86Y07 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VRK2Q86Y07 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.24■■□□□ 1.15
VRK2Q86Y07 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.23■■□□□ 1.15
VRK2Q86Y07 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRK2Q86Y07 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.22■■□□□ 1.15
VRK2Q86Y07 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.22■■□□□ 1.15
VRK2Q86Y07 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VRK2Q86Y07 AC025884.2-201ENST00000553429 711 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms