Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
VPS36Q86VN1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.93■■□□□ 1.74
VPS36Q86VN1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VPS36Q86VN1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.93■■□□□ 1.74
VPS36Q86VN1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
VPS36Q86VN1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
VPS36Q86VN1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VPS36Q86VN1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.92■■□□□ 1.74
VPS36Q86VN1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.92■■□□□ 1.74
VPS36Q86VN1 AC016575.1-201ENST00000607026 382 ntBASIC25.92■■□□□ 1.74
VPS36Q86VN1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
VPS36Q86VN1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.92■■□□□ 1.74
VPS36Q86VN1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VPS36Q86VN1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
VPS36Q86VN1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.91■■□□□ 1.74
VPS36Q86VN1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS36Q86VN1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
VPS36Q86VN1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
VPS36Q86VN1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.9■■□□□ 1.74
VPS36Q86VN1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS36Q86VN1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS36Q86VN1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.9■■□□□ 1.74
VPS36Q86VN1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
VPS36Q86VN1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.89■■□□□ 1.74
VPS36Q86VN1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
VPS36Q86VN1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
VPS36Q86VN1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
VPS36Q86VN1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
VPS36Q86VN1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
VPS36Q86VN1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.88■■□□□ 1.73
VPS36Q86VN1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.88■■□□□ 1.73
VPS36Q86VN1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.88■■□□□ 1.73
VPS36Q86VN1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
VPS36Q86VN1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS36Q86VN1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
VPS36Q86VN1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.87■■□□□ 1.73
VPS36Q86VN1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
VPS36Q86VN1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS36Q86VN1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS36Q86VN1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
VPS36Q86VN1 MIR639-201ENST00000384974 98 ntBASIC25.86■■□□□ 1.73
VPS36Q86VN1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS36Q86VN1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.86■■□□□ 1.73
VPS36Q86VN1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS36Q86VN1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS36Q86VN1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
VPS36Q86VN1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS36Q86VN1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.85■■□□□ 1.73
VPS36Q86VN1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS36Q86VN1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.85■■□□□ 1.73
VPS36Q86VN1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.85■■□□□ 1.73
VPS36Q86VN1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS36Q86VN1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS36Q86VN1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
VPS36Q86VN1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS36Q86VN1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS36Q86VN1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
VPS36Q86VN1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS36Q86VN1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS36Q86VN1 AC096887.2-201ENST00000623443 1957 ntBASIC25.84■■□□□ 1.73
VPS36Q86VN1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS36Q86VN1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS36Q86VN1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS36Q86VN1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS36Q86VN1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS36Q86VN1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
VPS36Q86VN1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS36Q86VN1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
VPS36Q86VN1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS36Q86VN1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS36Q86VN1 AC142381.3-201ENST00000568208 1670 ntBASIC25.81■■□□□ 1.72
VPS36Q86VN1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS36Q86VN1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS36Q86VN1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS36Q86VN1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.81■■□□□ 1.72
VPS36Q86VN1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS36Q86VN1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS36Q86VN1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS36Q86VN1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS36Q86VN1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.78■■□□□ 1.72
VPS36Q86VN1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS36Q86VN1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS36Q86VN1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS36Q86VN1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.77■■□□□ 1.72
VPS36Q86VN1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VPS36Q86VN1 MIR4449-201ENST00000578365 66 ntBASIC25.77■■□□□ 1.72
VPS36Q86VN1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms