Protein–RNA interactions for Protein: Q86UT5

PDZD3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3Q86UT5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDZD3Q86UT5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDZD3Q86UT5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.91■■□□□ 1.42
PDZD3Q86UT5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD3Q86UT5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDZD3Q86UT5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDZD3Q86UT5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDZD3Q86UT5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDZD3Q86UT5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.89■■□□□ 1.42
PDZD3Q86UT5 RP9P-202ENST00000450133 1212 ntBASIC23.89■■□□□ 1.41
PDZD3Q86UT5 AL592293.1-201ENST00000502889 1188 ntBASIC23.89■■□□□ 1.41
PDZD3Q86UT5 KRT8P33-201ENST00000508125 1423 ntBASIC23.89■■□□□ 1.41
PDZD3Q86UT5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PDZD3Q86UT5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.88■■□□□ 1.41
PDZD3Q86UT5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.88■■□□□ 1.41
PDZD3Q86UT5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZD3Q86UT5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.87■■□□□ 1.41
PDZD3Q86UT5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.86■■□□□ 1.41
PDZD3Q86UT5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZD3Q86UT5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZD3Q86UT5 AC093536.1-201ENST00000569153 554 ntBASIC23.85■■□□□ 1.41
PDZD3Q86UT5 BHLHE23-202ENST00000612929 1109 ntBASIC23.85■■□□□ 1.41
PDZD3Q86UT5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDZD3Q86UT5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.84■■□□□ 1.41
PDZD3Q86UT5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.84■■□□□ 1.41
PDZD3Q86UT5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDZD3Q86UT5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.83■■□□□ 1.41
PDZD3Q86UT5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDZD3Q86UT5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDZD3Q86UT5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDZD3Q86UT5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.83■■□□□ 1.4
PDZD3Q86UT5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDZD3Q86UT5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDZD3Q86UT5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDZD3Q86UT5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 AC010980.1-201ENST00000587192 1142 ntBASIC23.82■■□□□ 1.4
PDZD3Q86UT5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.82■■□□□ 1.4
PDZD3Q86UT5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.81■■□□□ 1.4
PDZD3Q86UT5 AL356441.2-201ENST00000443009 864 ntBASIC23.81■■□□□ 1.4
PDZD3Q86UT5 AC133552.2-201ENST00000619106 1032 ntBASIC23.81■■□□□ 1.4
PDZD3Q86UT5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.8■■□□□ 1.4
PDZD3Q86UT5 AC026202.3-201ENST00000600805 1127 ntBASIC23.79■■□□□ 1.4
PDZD3Q86UT5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.79■■□□□ 1.4
PDZD3Q86UT5 AC009831.1-201ENST00000580420 1582 ntBASIC23.78■■□□□ 1.4
PDZD3Q86UT5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 RAP2CP1-202ENST00000605179 643 ntBASIC23.78■■□□□ 1.4
PDZD3Q86UT5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.78■■□□□ 1.4
PDZD3Q86UT5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 YBX1P4-201ENST00000392794 808 ntBASIC23.77■■□□□ 1.4
PDZD3Q86UT5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
PDZD3Q86UT5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms