Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF44Q7L0R7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF44Q7L0R7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF44Q7L0R7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF44Q7L0R7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RNF44Q7L0R7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF44Q7L0R7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF44Q7L0R7 SPCS2P3-201ENST00000500401 656 ntBASIC23.17■■□□□ 1.3
RNF44Q7L0R7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF44Q7L0R7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF44Q7L0R7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RNF44Q7L0R7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF44Q7L0R7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF44Q7L0R7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF44Q7L0R7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 AC004987.1-201ENST00000428627 508 ntBASIC23.15■■□□□ 1.3
RNF44Q7L0R7 ATP5G2P3-201ENST00000429083 425 ntBASIC23.15■■□□□ 1.3
RNF44Q7L0R7 DUX4L9-201ENST00000449051 1259 ntBASIC23.15■■□□□ 1.3
RNF44Q7L0R7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF44Q7L0R7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RNF44Q7L0R7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.14■■□□□ 1.29
RNF44Q7L0R7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF44Q7L0R7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RNF44Q7L0R7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF44Q7L0R7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF44Q7L0R7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RNF44Q7L0R7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF44Q7L0R7 TSPY13P-201ENST00000338964 914 ntBASIC23.12■■□□□ 1.29
RNF44Q7L0R7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF44Q7L0R7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF44Q7L0R7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RNF44Q7L0R7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF44Q7L0R7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 MIR6765-201ENST00000614092 87 ntBASIC23.09■■□□□ 1.29
RNF44Q7L0R7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RNF44Q7L0R7 AL033527.3-201ENST00000566366 1196 ntBASIC23.08■■□□□ 1.29
RNF44Q7L0R7 AC018755.3-202ENST00000596210 929 ntBASIC23.08■■□□□ 1.29
RNF44Q7L0R7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF44Q7L0R7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.29
RNF44Q7L0R7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF44Q7L0R7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF44Q7L0R7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF44Q7L0R7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF44Q7L0R7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms