Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCRAQ6ISU1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
PTCRAQ6ISU1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.51■■□□□ 1.67
PTCRAQ6ISU1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCRAQ6ISU1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.5■■□□□ 1.67
PTCRAQ6ISU1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.5■■□□□ 1.67
PTCRAQ6ISU1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.5■■□□□ 1.67
PTCRAQ6ISU1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.5■■□□□ 1.67
PTCRAQ6ISU1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 AC092028.1-203ENST00000608262 953 ntBASIC25.49■■□□□ 1.67
PTCRAQ6ISU1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.48■■□□□ 1.67
PTCRAQ6ISU1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PTCRAQ6ISU1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.47■■□□□ 1.67
PTCRAQ6ISU1 RARRES2P6-201ENST00000567333 442 ntBASIC25.47■■□□□ 1.67
PTCRAQ6ISU1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 AL117332.1-201ENST00000622628 974 ntBASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PTCRAQ6ISU1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PTCRAQ6ISU1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PTCRAQ6ISU1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 AC133561.4-201ENST00000566112 224 ntBASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
PTCRAQ6ISU1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PTCRAQ6ISU1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCRAQ6ISU1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.42■■□□□ 1.66
PTCRAQ6ISU1 MIR3621-201ENST00000580529 85 ntBASIC25.42■■□□□ 1.66
PTCRAQ6ISU1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCRAQ6ISU1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCRAQ6ISU1 AP002414.2-202ENST00000590929 1450 ntBASIC25.41■■□□□ 1.66
PTCRAQ6ISU1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCRAQ6ISU1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.41■■□□□ 1.66
PTCRAQ6ISU1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.41■■□□□ 1.66
PTCRAQ6ISU1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCRAQ6ISU1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 AC120024.1-201ENST00000562672 995 ntBASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.4■■□□□ 1.66
PTCRAQ6ISU1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCRAQ6ISU1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCRAQ6ISU1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.39■■□□□ 1.66
PTCRAQ6ISU1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.39■■□□□ 1.66
PTCRAQ6ISU1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
PTCRAQ6ISU1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.39■■□□□ 1.65
PTCRAQ6ISU1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCRAQ6ISU1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.38■■□□□ 1.65
PTCRAQ6ISU1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCRAQ6ISU1 AC010997.5-201ENST00000609182 354 ntBASIC25.38■■□□□ 1.65
PTCRAQ6ISU1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.38■■□□□ 1.65
PTCRAQ6ISU1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 KRT18P10-201ENST00000388836 1287 ntBASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PTCRAQ6ISU1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 AL356740.2-201ENST00000601559 647 ntBASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 MIR4466-201ENST00000606121 54 ntBASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCRAQ6ISU1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 ST7-AS1-201ENST00000456775 1889 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 AC104564.3-201ENST00000582367 638 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 MIR6724-1-201ENST00000616420 92 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 MIR6724-2-201ENST00000616483 92 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 MIR6724-4-201ENST00000617390 92 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 MIR6724-3-201ENST00000622482 92 ntBASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
PTCRAQ6ISU1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCRAQ6ISU1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCRAQ6ISU1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms