Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR4508-201ENST00000584178 70 ntBASIC22■■□□□ 1.11
RNFT1Q5M7Z0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNFT1Q5M7Z0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22■■□□□ 1.11
RNFT1Q5M7Z0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
RNFT1Q5M7Z0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RNFT1Q5M7Z0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNFT1Q5M7Z0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNFT1Q5M7Z0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.99■■□□□ 1.11
RNFT1Q5M7Z0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNFT1Q5M7Z0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 RPS2P7-201ENST00000447334 885 ntBASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 AC009299.2-201ENST00000482477 511 ntBASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 AC142472.1-201ENST00000612013 1741 ntBASIC21.97■■□□□ 1.11
RNFT1Q5M7Z0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.96■■□□□ 1.11
RNFT1Q5M7Z0 AC142086.6-201ENST00000621154 1765 ntBASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 AC103724.3-201ENST00000564481 992 ntBASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNFT1Q5M7Z0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNFT1Q5M7Z0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RNFT1Q5M7Z0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RNFT1Q5M7Z0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNFT1Q5M7Z0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 AC019171.1-201ENST00000601251 1056 ntBASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNFT1Q5M7Z0 AP004609.3-201ENST00000610705 1884 ntBASIC21.92■■□□□ 1.1
RNFT1Q5M7Z0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNFT1Q5M7Z0 LONRF2P2-201ENST00000439212 571 ntBASIC21.92■■□□□ 1.1
RNFT1Q5M7Z0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNFT1Q5M7Z0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNFT1Q5M7Z0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNFT1Q5M7Z0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNFT1Q5M7Z0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNFT1Q5M7Z0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNFT1Q5M7Z0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNFT1Q5M7Z0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNFT1Q5M7Z0 AL031848.2-201ENST00000607670 837 ntBASIC21.88■■□□□ 1.09
RNFT1Q5M7Z0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
RNFT1Q5M7Z0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.86■■□□□ 1.09
RNFT1Q5M7Z0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms