Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB5BP61020 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB5BP61020 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB5BP61020 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB5BP61020 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB5BP61020 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RAB5BP61020 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB5BP61020 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB5BP61020 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB5BP61020 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB5BP61020 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB5BP61020 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB5BP61020 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19■□□□□ 0.63
RAB5BP61020 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19■□□□□ 0.63
RAB5BP61020 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB5BP61020 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB5BP61020 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB5BP61020 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB5BP61020 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 AL121603.2-201ENST00000557373 2117 ntBASIC18.98■□□□□ 0.63
RAB5BP61020 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB5BP61020 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB5BP61020 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RAB5BP61020 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
RAB5BP61020 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RAB5BP61020 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB5BP61020 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB5BP61020 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAB5BP61020 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAB5BP61020 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAB5BP61020 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB5BP61020 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB5BP61020 DUSP8P5-201ENST00000422884 1815 ntBASIC18.97■□□□□ 0.63
RAB5BP61020 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB5BP61020 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAB5BP61020 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RAB5BP61020 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RAB5BP61020 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB5BP61020 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB5BP61020 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB5BP61020 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAB5BP61020 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RAB5BP61020 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB5BP61020 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB5BP61020 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB5BP61020 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB5BP61020 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB5BP61020 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RAB5BP61020 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB5BP61020 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB5BP61020 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB5BP61020 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5BP61020 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5BP61020 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5BP61020 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB5BP61020 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB5BP61020 AL117328.2-201ENST00000624617 1940 ntBASIC18.93■□□□□ 0.62
RAB5BP61020 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5BP61020 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB5BP61020 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB5BP61020 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5BP61020 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB5BP61020 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB5BP61020 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB5BP61020 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5BP61020 C9orf163-202ENST00000624034 2573 ntBASIC18.92■□□□□ 0.62
RAB5BP61020 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5BP61020 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RAB5BP61020 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB5BP61020 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5BP61020 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5BP61020 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5BP61020 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 AC097639.1-201ENST00000565519 1891 ntBASIC18.91■□□□□ 0.62
RAB5BP61020 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5BP61020 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5BP61020 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5BP61020 AC138932.3-201ENST00000567634 1902 ntBASIC18.9■□□□□ 0.62
RAB5BP61020 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5BP61020 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5BP61020 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms