Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN12P56749 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN12P56749 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN12P56749 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN12P56749 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN12P56749 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN12P56749 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLDN12P56749 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN12P56749 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN12P56749 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN12P56749 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN12P56749 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN12P56749 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLDN12P56749 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLDN12P56749 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
CLDN12P56749 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN12P56749 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN12P56749 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN12P56749 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN12P56749 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLDN12P56749 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN12P56749 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN12P56749 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN12P56749 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CLDN12P56749 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN12P56749 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN12P56749 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN12P56749 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN12P56749 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN12P56749 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN12P56749 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN12P56749 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 AC087741.3-201ENST00000624270 1347 ntBASIC20.87■□□□□ 0.93
CLDN12P56749 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
CLDN12P56749 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN12P56749 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN12P56749 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN12P56749 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN12P56749 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLDN12P56749 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN12P56749 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN12P56749 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLDN12P56749 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN12P56749 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN12P56749 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN12P56749 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN12P56749 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN12P56749 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN12P56749 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN12P56749 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CLDN12P56749 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN12P56749 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLDN12P56749 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN12P56749 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLDN12P56749 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN12P56749 AP006261.1-201ENST00000584783 668 ntBASIC20.83■□□□□ 0.93
CLDN12P56749 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN12P56749 AC133561.1-201ENST00000568600 2415 ntBASIC20.82■□□□□ 0.92
CLDN12P56749 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN12P56749 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN12P56749 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN12P56749 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN12P56749 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN12P56749 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN12P56749 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN12P56749 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN12P56749 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN12P56749 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN12P56749 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN12P56749 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN12P56749 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN12P56749 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN12P56749 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN12P56749 AC021231.2-201ENST00000594613 730 ntBASIC20.8■□□□□ 0.92
CLDN12P56749 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLDN12P56749 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN12P56749 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN12P56749 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CLDN12P56749 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms