Protein–RNA interactions for Protein: P51684

CCR6, C-C chemokine receptor type 6, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR6P51684 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCR6P51684 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCR6P51684 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR6P51684 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.58■□□□□ 0.88
CCR6P51684 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.58■□□□□ 0.88
CCR6P51684 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CCR6P51684 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR6P51684 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCR6P51684 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCR6P51684 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
CCR6P51684 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCR6P51684 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCR6P51684 WHAMMP3-201ENST00000611636 1609 ntBASIC20.56■□□□□ 0.88
CCR6P51684 CLDN5-201ENST00000403084 2357 ntBASIC20.56■□□□□ 0.88
CCR6P51684 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCR6P51684 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.56■□□□□ 0.88
CCR6P51684 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCR6P51684 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCR6P51684 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR6P51684 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
CCR6P51684 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.54■□□□□ 0.88
CCR6P51684 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR6P51684 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR6P51684 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR6P51684 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR6P51684 AC097639.1-201ENST00000565519 1891 ntBASIC20.54■□□□□ 0.88
CCR6P51684 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
CCR6P51684 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.53■□□□□ 0.88
CCR6P51684 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.53■□□□□ 0.88
CCR6P51684 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCR6P51684 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCR6P51684 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CCR6P51684 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 RARRES2P7-201ENST00000567349 469 ntBASIC20.52■□□□□ 0.88
CCR6P51684 SETD8P1-201ENST00000623146 1180 ntBASIC20.52■□□□□ 0.88
CCR6P51684 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR6P51684 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCR6P51684 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCR6P51684 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.51■□□□□ 0.87
CCR6P51684 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCR6P51684 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.51■□□□□ 0.87
CCR6P51684 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCR6P51684 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCR6P51684 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CCR6P51684 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CCR6P51684 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCR6P51684 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCR6P51684 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCR6P51684 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.49■□□□□ 0.87
CCR6P51684 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCR6P51684 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCR6P51684 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCR6P51684 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCR6P51684 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.48■□□□□ 0.87
CCR6P51684 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.48■□□□□ 0.87
CCR6P51684 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCR6P51684 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.48■□□□□ 0.87
CCR6P51684 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCR6P51684 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.47■□□□□ 0.87
CCR6P51684 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCR6P51684 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCR6P51684 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.47■□□□□ 0.87
CCR6P51684 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CCR6P51684 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 AC096887.2-201ENST00000623443 1957 ntBASIC20.46■□□□□ 0.87
CCR6P51684 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCR6P51684 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCR6P51684 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms