Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XCL1P47992 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XCL1P47992 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.46■□□□□ 0.23
XCL1P47992 AC010501.1-201ENST00000606270 1962 ntBASIC16.46■□□□□ 0.23
XCL1P47992 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
XCL1P47992 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.46■□□□□ 0.23
XCL1P47992 ZNRF2P2-203ENST00000454624 420 ntBASIC16.46■□□□□ 0.23
XCL1P47992 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XCL1P47992 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.46■□□□□ 0.23
XCL1P47992 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XCL1P47992 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
XCL1P47992 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
XCL1P47992 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XCL1P47992 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
XCL1P47992 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
XCL1P47992 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
XCL1P47992 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
XCL1P47992 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.45■□□□□ 0.22
XCL1P47992 AC148477.6-201ENST00000623746 465 ntBASIC16.45■□□□□ 0.22
XCL1P47992 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 AL359258.2-201ENST00000564063 1566 ntBASIC16.45■□□□□ 0.22
XCL1P47992 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
XCL1P47992 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XCL1P47992 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.44■□□□□ 0.22
XCL1P47992 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XCL1P47992 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.44■□□□□ 0.22
XCL1P47992 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
XCL1P47992 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.43■□□□□ 0.22
XCL1P47992 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.43■□□□□ 0.22
XCL1P47992 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.43■□□□□ 0.22
XCL1P47992 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XCL1P47992 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 HLA-V-202ENST00000446817 847 ntBASIC16.42■□□□□ 0.22
XCL1P47992 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.42■□□□□ 0.22
XCL1P47992 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.42■□□□□ 0.22
XCL1P47992 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.42■□□□□ 0.22
XCL1P47992 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XCL1P47992 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
XCL1P47992 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
XCL1P47992 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
XCL1P47992 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
XCL1P47992 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
XCL1P47992 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XCL1P47992 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XCL1P47992 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XCL1P47992 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.4■□□□□ 0.22
XCL1P47992 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.4■□□□□ 0.22
XCL1P47992 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.4■□□□□ 0.22
XCL1P47992 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.4■□□□□ 0.22
XCL1P47992 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XCL1P47992 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
XCL1P47992 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.39■□□□□ 0.21
XCL1P47992 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCL1P47992 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCL1P47992 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCL1P47992 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCL1P47992 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.39■□□□□ 0.21
XCL1P47992 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
XCL1P47992 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.38■□□□□ 0.21
XCL1P47992 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XCL1P47992 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XCL1P47992 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCL1P47992 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
XCL1P47992 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XCL1P47992 AL359504.2-201ENST00000605506 1601 ntBASIC16.37■□□□□ 0.21
XCL1P47992 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCL1P47992 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.37■□□□□ 0.21
XCL1P47992 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.37■□□□□ 0.21
XCL1P47992 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCL1P47992 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCL1P47992 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCL1P47992 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCL1P47992 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
XCL1P47992 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms