Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.14■□□□□ 0.18
CXCL5P42830 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 AC012676.1-201ENST00000574705 1949 ntBASIC16.14■□□□□ 0.17
CXCL5P42830 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CXCL5P42830 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.14■□□□□ 0.17
CXCL5P42830 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CXCL5P42830 ERN1-208ENST00000606895 2068 ntBASIC16.14■□□□□ 0.17
CXCL5P42830 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.13■□□□□ 0.17
CXCL5P42830 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.13■□□□□ 0.17
CXCL5P42830 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CXCL5P42830 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CXCL5P42830 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CXCL5P42830 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CXCL5P42830 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.12■□□□□ 0.17
CXCL5P42830 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.12■□□□□ 0.17
CXCL5P42830 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.12■□□□□ 0.17
CXCL5P42830 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CXCL5P42830 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.11■□□□□ 0.17
CXCL5P42830 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CXCL5P42830 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCL5P42830 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCL5P42830 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CXCL5P42830 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCL5P42830 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CXCL5P42830 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CXCL5P42830 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CXCL5P42830 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCL5P42830 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCL5P42830 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CXCL5P42830 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 DUX4L29-201ENST00000425409 679 ntBASIC16.08■□□□□ 0.16
CXCL5P42830 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CXCL5P42830 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
CXCL5P42830 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCL5P42830 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCL5P42830 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CXCL5P42830 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCL5P42830 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXCL5P42830 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.06■□□□□ 0.16
CXCL5P42830 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CXCL5P42830 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCL5P42830 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 AC008813.1-201ENST00000536597 885 ntBASIC16.05■□□□□ 0.16
CXCL5P42830 AC021231.2-201ENST00000594613 730 ntBASIC16.05■□□□□ 0.16
CXCL5P42830 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms