Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.29■■□□□ 1.16
UBL4AP11441 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
UBL4AP11441 ECEL1P2-201ENST00000461596 1295 ntBASIC22.29■■□□□ 1.16
UBL4AP11441 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.29■■□□□ 1.16
UBL4AP11441 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBL4AP11441 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
UBL4AP11441 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.28■■□□□ 1.16
UBL4AP11441 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.28■■□□□ 1.16
UBL4AP11441 AC025884.2-201ENST00000553429 711 ntBASIC22.28■■□□□ 1.16
UBL4AP11441 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.28■■□□□ 1.16
UBL4AP11441 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBL4AP11441 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.27■■□□□ 1.16
UBL4AP11441 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBL4AP11441 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBL4AP11441 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.27■■□□□ 1.16
UBL4AP11441 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBL4AP11441 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.27■■□□□ 1.16
UBL4AP11441 SMPD5-203ENST00000639008 1464 ntBASIC22.27■■□□□ 1.16
UBL4AP11441 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBL4AP11441 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.27■■□□□ 1.16
UBL4AP11441 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.26■■□□□ 1.15
UBL4AP11441 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBL4AP11441 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
UBL4AP11441 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.26■■□□□ 1.15
UBL4AP11441 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.26■■□□□ 1.15
UBL4AP11441 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBL4AP11441 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBL4AP11441 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.25■■□□□ 1.15
UBL4AP11441 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UBL4AP11441 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.25■■□□□ 1.15
UBL4AP11441 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBL4AP11441 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UBL4AP11441 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBL4AP11441 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
UBL4AP11441 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBL4AP11441 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBL4AP11441 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.24■■□□□ 1.15
UBL4AP11441 MIR3960-201ENST00000583311 91 ntBASIC22.24■■□□□ 1.15
UBL4AP11441 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBL4AP11441 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBL4AP11441 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UBL4AP11441 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.24■■□□□ 1.15
UBL4AP11441 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.23■■□□□ 1.15
UBL4AP11441 DUSP8P4-201ENST00000399538 1761 ntBASIC22.23■■□□□ 1.15
UBL4AP11441 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.23■■□□□ 1.15
UBL4AP11441 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBL4AP11441 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
UBL4AP11441 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
UBL4AP11441 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.22■■□□□ 1.15
UBL4AP11441 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.22■■□□□ 1.15
UBL4AP11441 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
UBL4AP11441 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
UBL4AP11441 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.21■■□□□ 1.15
UBL4AP11441 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
UBL4AP11441 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.21■■□□□ 1.15
UBL4AP11441 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
UBL4AP11441 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
UBL4AP11441 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
UBL4AP11441 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
UBL4AP11441 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.2■■□□□ 1.14
UBL4AP11441 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.2■■□□□ 1.14
UBL4AP11441 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
UBL4AP11441 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBL4AP11441 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
UBL4AP11441 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
UBL4AP11441 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
UBL4AP11441 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBL4AP11441 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBL4AP11441 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.19■■□□□ 1.14
UBL4AP11441 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.18■■□□□ 1.14
UBL4AP11441 ERN1-208ENST00000606895 2068 ntBASIC22.18■■□□□ 1.14
UBL4AP11441 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBL4AP11441 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.18■■□□□ 1.14
UBL4AP11441 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.18■■□□□ 1.14
UBL4AP11441 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.18■■□□□ 1.14
UBL4AP11441 AC010501.1-201ENST00000606270 1962 ntBASIC22.18■■□□□ 1.14
UBL4AP11441 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBL4AP11441 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.17■■□□□ 1.14
UBL4AP11441 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBL4AP11441 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
UBL4AP11441 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBL4AP11441 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.17■■□□□ 1.14
UBL4AP11441 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.17■■□□□ 1.14
UBL4AP11441 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
UBL4AP11441 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UBL4AP11441 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBL4AP11441 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.17■■□□□ 1.14
UBL4AP11441 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.16■■□□□ 1.14
UBL4AP11441 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UBL4AP11441 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBL4AP11441 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBL4AP11441 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.16■■□□□ 1.14
UBL4AP11441 RP9P-202ENST00000450133 1212 ntBASIC22.16■■□□□ 1.14
UBL4AP11441 AC007029.1-201ENST00000604183 313 ntBASIC22.16■■□□□ 1.14
UBL4AP11441 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms