Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 MIR3648-2-201ENST00000581792 180 ntBASIC25.65■■□□□ 1.7
TMEM253P0C7T8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 MIR3648-1-201ENST00000615959 180 ntBASIC25.65■■□□□ 1.7
TMEM253P0C7T8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
TMEM253P0C7T8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMEM253P0C7T8 AC126177.7-201ENST00000547904 679 ntBASIC25.63■■□□□ 1.69
TMEM253P0C7T8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.63■■□□□ 1.69
TMEM253P0C7T8 AC142381.3-201ENST00000568208 1670 ntBASIC25.62■■□□□ 1.69
TMEM253P0C7T8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TMEM253P0C7T8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM253P0C7T8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM253P0C7T8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM253P0C7T8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM253P0C7T8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM253P0C7T8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM253P0C7T8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM253P0C7T8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM253P0C7T8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM253P0C7T8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM253P0C7T8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM253P0C7T8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.59■■□□□ 1.69
TMEM253P0C7T8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.58■■□□□ 1.68
TMEM253P0C7T8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM253P0C7T8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM253P0C7T8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.57■■□□□ 1.68
TMEM253P0C7T8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM253P0C7T8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.57■■□□□ 1.68
TMEM253P0C7T8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 AC093323.1-202ENST00000635031 2045 ntBASIC25.56■■□□□ 1.68
TMEM253P0C7T8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 AC022211.4-201ENST00000625094 2161 ntBASIC25.56■■□□□ 1.68
TMEM253P0C7T8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM253P0C7T8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM253P0C7T8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM253P0C7T8 AC016575.1-201ENST00000607026 382 ntBASIC25.55■■□□□ 1.68
TMEM253P0C7T8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM253P0C7T8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TMEM253P0C7T8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM253P0C7T8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM253P0C7T8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TMEM253P0C7T8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TMEM253P0C7T8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMEM253P0C7T8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM253P0C7T8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
TMEM253P0C7T8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM253P0C7T8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.51■■□□□ 1.67
TMEM253P0C7T8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.51■■□□□ 1.67
TMEM253P0C7T8 AC138932.3-201ENST00000567634 1902 ntBASIC25.51■■□□□ 1.67
TMEM253P0C7T8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM253P0C7T8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM253P0C7T8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM253P0C7T8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM253P0C7T8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM253P0C7T8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM253P0C7T8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM253P0C7T8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM253P0C7T8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM253P0C7T8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM253P0C7T8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms