Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 DUX4L28-201ENST00000623687 678 ntBASIC18.18■□□□□ 0.5
LTAP01374 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.18■□□□□ 0.5
LTAP01374 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LTAP01374 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.18■□□□□ 0.5
LTAP01374 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LTAP01374 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LTAP01374 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LTAP01374 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
LTAP01374 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LTAP01374 AC012676.1-201ENST00000574705 1949 ntBASIC18.17■□□□□ 0.5
LTAP01374 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LTAP01374 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 AC133561.1-201ENST00000568600 2415 ntBASIC18.16■□□□□ 0.5
LTAP01374 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.16■□□□□ 0.5
LTAP01374 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
LTAP01374 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.16■□□□□ 0.5
LTAP01374 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LTAP01374 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LTAP01374 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LTAP01374 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.15■□□□□ 0.5
LTAP01374 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LTAP01374 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LTAP01374 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LTAP01374 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LTAP01374 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LTAP01374 LINC01124-201ENST00000409786 2117 ntBASIC18.15■□□□□ 0.5
LTAP01374 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.15■□□□□ 0.5
LTAP01374 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LTAP01374 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
LTAP01374 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LTAP01374 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.14■□□□□ 0.5
LTAP01374 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LTAP01374 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.14■□□□□ 0.49
LTAP01374 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LTAP01374 AP003733.4-201ENST00000623785 1697 ntBASIC18.14■□□□□ 0.49
LTAP01374 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LTAP01374 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LTAP01374 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.13■□□□□ 0.49
LTAP01374 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.13■□□□□ 0.49
LTAP01374 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
LTAP01374 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LTAP01374 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.12■□□□□ 0.49
LTAP01374 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
LTAP01374 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.12■□□□□ 0.49
LTAP01374 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.12■□□□□ 0.49
LTAP01374 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LTAP01374 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LTAP01374 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.11■□□□□ 0.49
LTAP01374 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.11■□□□□ 0.49
LTAP01374 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LTAP01374 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.11■□□□□ 0.49
LTAP01374 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LTAP01374 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.1■□□□□ 0.49
LTAP01374 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.1■□□□□ 0.49
LTAP01374 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LTAP01374 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
LTAP01374 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LTAP01374 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LTAP01374 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LTAP01374 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LTAP01374 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.09■□□□□ 0.49
LTAP01374 MIR3665-201ENST00000578708 105 ntBASIC18.09■□□□□ 0.49
LTAP01374 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LTAP01374 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LTAP01374 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LTAP01374 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LTAP01374 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LTAP01374 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LTAP01374 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LTAP01374 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.08■□□□□ 0.48
LTAP01374 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.08■□□□□ 0.48
LTAP01374 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms