Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN9O75954 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN9O75954 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TSPAN9O75954 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN9O75954 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN9O75954 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.47■□□□□ 0.87
TSPAN9O75954 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TSPAN9O75954 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.47■□□□□ 0.87
TSPAN9O75954 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN9O75954 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.47■□□□□ 0.87
TSPAN9O75954 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN9O75954 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TSPAN9O75954 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN9O75954 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TSPAN9O75954 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.46■□□□□ 0.87
TSPAN9O75954 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN9O75954 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN9O75954 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TSPAN9O75954 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN9O75954 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN9O75954 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN9O75954 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN9O75954 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN9O75954 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN9O75954 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TSPAN9O75954 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.43■□□□□ 0.86
TSPAN9O75954 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.43■□□□□ 0.86
TSPAN9O75954 AC127502.1-201ENST00000399971 1502 ntBASIC20.43■□□□□ 0.86
TSPAN9O75954 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.43■□□□□ 0.86
TSPAN9O75954 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.43■□□□□ 0.86
TSPAN9O75954 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TSPAN9O75954 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN9O75954 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN9O75954 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TSPAN9O75954 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN9O75954 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.4■□□□□ 0.86
TSPAN9O75954 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN9O75954 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.4■□□□□ 0.86
TSPAN9O75954 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TSPAN9O75954 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
TSPAN9O75954 AC135983.2-203ENST00000454486 1613 ntBASIC20.39■□□□□ 0.86
TSPAN9O75954 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TSPAN9O75954 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN9O75954 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN9O75954 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.38■□□□□ 0.85
TSPAN9O75954 AC008813.1-201ENST00000536597 885 ntBASIC20.38■□□□□ 0.85
TSPAN9O75954 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.38■□□□□ 0.85
TSPAN9O75954 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN9O75954 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN9O75954 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN9O75954 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
TSPAN9O75954 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TSPAN9O75954 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.37■□□□□ 0.85
TSPAN9O75954 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN9O75954 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN9O75954 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN9O75954 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TSPAN9O75954 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN9O75954 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN9O75954 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN9O75954 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.36■□□□□ 0.85
TSPAN9O75954 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TSPAN9O75954 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.36■□□□□ 0.85
TSPAN9O75954 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN9O75954 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TSPAN9O75954 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TSPAN9O75954 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.35■□□□□ 0.85
TSPAN9O75954 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN9O75954 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN9O75954 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN9O75954 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN9O75954 WHAMMP2-203ENST00000563942 1603 ntBASIC20.35■□□□□ 0.85
TSPAN9O75954 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TSPAN9O75954 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN9O75954 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TSPAN9O75954 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms