Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM3O75382 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM3O75382 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
TRIM3O75382 AC026202.3-201ENST00000600805 1127 ntBASIC22.38■■□□□ 1.17
TRIM3O75382 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.38■■□□□ 1.17
TRIM3O75382 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM3O75382 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM3O75382 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM3O75382 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM3O75382 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TRIM3O75382 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.37■■□□□ 1.17
TRIM3O75382 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM3O75382 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM3O75382 AC093536.1-201ENST00000569153 554 ntBASIC22.37■■□□□ 1.17
TRIM3O75382 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM3O75382 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM3O75382 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TRIM3O75382 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM3O75382 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM3O75382 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM3O75382 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TRIM3O75382 AC133552.2-201ENST00000619106 1032 ntBASIC22.36■■□□□ 1.17
TRIM3O75382 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM3O75382 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM3O75382 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM3O75382 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM3O75382 KRT18P60-201ENST00000312876 1297 ntBASIC22.35■■□□□ 1.17
TRIM3O75382 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM3O75382 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM3O75382 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.35■■□□□ 1.17
TRIM3O75382 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM3O75382 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TRIM3O75382 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 RAP2CP1-202ENST00000605179 643 ntBASIC22.34■■□□□ 1.17
TRIM3O75382 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM3O75382 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM3O75382 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TRIM3O75382 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
TRIM3O75382 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM3O75382 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM3O75382 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM3O75382 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM3O75382 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM3O75382 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM3O75382 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM3O75382 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.32■■□□□ 1.16
TRIM3O75382 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM3O75382 AC012354.3-201ENST00000623734 483 ntBASIC22.32■■□□□ 1.16
TRIM3O75382 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TRIM3O75382 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.31■■□□□ 1.16
TRIM3O75382 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM3O75382 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TRIM3O75382 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM3O75382 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM3O75382 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TRIM3O75382 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.31■■□□□ 1.16
TRIM3O75382 AL592293.1-201ENST00000502889 1188 ntBASIC22.31■■□□□ 1.16
TRIM3O75382 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM3O75382 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
TRIM3O75382 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.3■■□□□ 1.16
TRIM3O75382 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.3■■□□□ 1.16
TRIM3O75382 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM3O75382 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM3O75382 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
TRIM3O75382 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM3O75382 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM3O75382 AC142472.1-201ENST00000612013 1741 ntBASIC22.29■■□□□ 1.16
TRIM3O75382 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
TRIM3O75382 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TRIM3O75382 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM3O75382 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM3O75382 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM3O75382 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM3O75382 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.29■■□□□ 1.16
TRIM3O75382 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM3O75382 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM3O75382 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM3O75382 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.27■■□□□ 1.16
TRIM3O75382 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
TRIM3O75382 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM3O75382 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRIM3O75382 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM3O75382 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM3O75382 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM3O75382 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM3O75382 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TRIM3O75382 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TRIM3O75382 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRIM3O75382 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM3O75382 AC129492.7-201ENST00000622992 756 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms