Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.26■□□□□ 0.99
SGCEO43556 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.26■□□□□ 0.99
SGCEO43556 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.26■□□□□ 0.99
SGCEO43556 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGCEO43556 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGCEO43556 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.26■□□□□ 0.99
SGCEO43556 DUSP8P4-201ENST00000399538 1761 ntBASIC21.25■□□□□ 0.99
SGCEO43556 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.25■□□□□ 0.99
SGCEO43556 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGCEO43556 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SGCEO43556 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCEO43556 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCEO43556 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.24■□□□□ 0.99
SGCEO43556 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCEO43556 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGCEO43556 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCEO43556 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.24■□□□□ 0.99
SGCEO43556 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGCEO43556 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.23■□□□□ 0.99
SGCEO43556 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGCEO43556 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SGCEO43556 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SGCEO43556 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGCEO43556 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.22■□□□□ 0.99
SGCEO43556 SMPD5-203ENST00000639008 1464 ntBASIC21.22■□□□□ 0.99
SGCEO43556 ECEL1P2-201ENST00000461596 1295 ntBASIC21.22■□□□□ 0.99
SGCEO43556 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.22■□□□□ 0.99
SGCEO43556 AC025884.2-201ENST00000553429 711 ntBASIC21.22■□□□□ 0.99
SGCEO43556 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.22■□□□□ 0.99
SGCEO43556 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SGCEO43556 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SGCEO43556 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SGCEO43556 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.21■□□□□ 0.99
SGCEO43556 GPX1-201ENST00000419349 1106 ntBASIC21.21■□□□□ 0.99
SGCEO43556 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SGCEO43556 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SGCEO43556 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.21■□□□□ 0.99
SGCEO43556 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
SGCEO43556 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SGCEO43556 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SGCEO43556 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SGCEO43556 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SGCEO43556 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SGCEO43556 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SGCEO43556 ERN1-208ENST00000606895 2068 ntBASIC21.19■□□□□ 0.98
SGCEO43556 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SGCEO43556 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SGCEO43556 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.19■□□□□ 0.98
SGCEO43556 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SGCEO43556 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.19■□□□□ 0.98
SGCEO43556 MIR3960-201ENST00000583311 91 ntBASIC21.19■□□□□ 0.98
SGCEO43556 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.19■□□□□ 0.98
SGCEO43556 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.18■□□□□ 0.98
SGCEO43556 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGCEO43556 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGCEO43556 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
SGCEO43556 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SGCEO43556 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGCEO43556 AC010501.1-201ENST00000606270 1962 ntBASIC21.17■□□□□ 0.98
SGCEO43556 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SGCEO43556 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGCEO43556 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SGCEO43556 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
SGCEO43556 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.16■□□□□ 0.98
SGCEO43556 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SGCEO43556 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGCEO43556 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGCEO43556 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGCEO43556 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.15■□□□□ 0.98
SGCEO43556 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.15■□□□□ 0.98
SGCEO43556 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.15■□□□□ 0.98
SGCEO43556 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.15■□□□□ 0.98
SGCEO43556 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGCEO43556 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SGCEO43556 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SGCEO43556 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.14■□□□□ 0.97
SGCEO43556 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.14■□□□□ 0.97
SGCEO43556 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SGCEO43556 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SGCEO43556 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SGCEO43556 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGCEO43556 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGCEO43556 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SGCEO43556 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.13■□□□□ 0.97
SGCEO43556 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.13■□□□□ 0.97
SGCEO43556 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.13■□□□□ 0.97
SGCEO43556 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGCEO43556 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGCEO43556 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms