Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC2O43543 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC2O43543 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC2O43543 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.95■□□□□ 0.94
XRCC2O43543 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.95■□□□□ 0.94
XRCC2O43543 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC2O43543 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.95■□□□□ 0.94
XRCC2O43543 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.95■□□□□ 0.94
XRCC2O43543 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC2O43543 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC2O43543 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC2O43543 AC092296.2-201ENST00000589470 999 ntBASIC20.94■□□□□ 0.94
XRCC2O43543 AC022413.1-201ENST00000624602 984 ntBASIC20.94■□□□□ 0.94
XRCC2O43543 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC2O43543 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC2O43543 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.94■□□□□ 0.94
XRCC2O43543 ERN1-208ENST00000606895 2068 ntBASIC20.93■□□□□ 0.94
XRCC2O43543 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC2O43543 AC025884.2-201ENST00000553429 711 ntBASIC20.93■□□□□ 0.94
XRCC2O43543 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC2O43543 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.93■□□□□ 0.94
XRCC2O43543 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC2O43543 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC2O43543 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC2O43543 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.92■□□□□ 0.94
XRCC2O43543 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.92■□□□□ 0.94
XRCC2O43543 MIR3960-201ENST00000583311 91 ntBASIC20.92■□□□□ 0.94
XRCC2O43543 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
XRCC2O43543 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC2O43543 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
XRCC2O43543 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XRCC2O43543 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.91■□□□□ 0.94
XRCC2O43543 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XRCC2O43543 ECEL1P2-201ENST00000461596 1295 ntBASIC20.91■□□□□ 0.94
XRCC2O43543 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
XRCC2O43543 SMPD5-203ENST00000639008 1464 ntBASIC20.91■□□□□ 0.94
XRCC2O43543 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.9■□□□□ 0.94
XRCC2O43543 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
XRCC2O43543 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
XRCC2O43543 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
XRCC2O43543 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
XRCC2O43543 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
XRCC2O43543 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
XRCC2O43543 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
XRCC2O43543 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.89■□□□□ 0.94
XRCC2O43543 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.89■□□□□ 0.93
XRCC2O43543 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
XRCC2O43543 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRCC2O43543 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.88■□□□□ 0.93
XRCC2O43543 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRCC2O43543 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRCC2O43543 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XRCC2O43543 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XRCC2O43543 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.88■□□□□ 0.93
XRCC2O43543 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
XRCC2O43543 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRCC2O43543 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRCC2O43543 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRCC2O43543 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRCC2O43543 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRCC2O43543 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
XRCC2O43543 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.87■□□□□ 0.93
XRCC2O43543 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.86■□□□□ 0.93
XRCC2O43543 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRCC2O43543 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRCC2O43543 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.86■□□□□ 0.93
XRCC2O43543 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.86■□□□□ 0.93
XRCC2O43543 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.86■□□□□ 0.93
XRCC2O43543 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
XRCC2O43543 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRCC2O43543 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
XRCC2O43543 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.85■□□□□ 0.93
XRCC2O43543 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XRCC2O43543 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.85■□□□□ 0.93
XRCC2O43543 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRCC2O43543 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.85■□□□□ 0.93
XRCC2O43543 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.85■□□□□ 0.93
XRCC2O43543 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
XRCC2O43543 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.85■□□□□ 0.93
XRCC2O43543 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRCC2O43543 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
XRCC2O43543 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRCC2O43543 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.84■□□□□ 0.93
XRCC2O43543 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.84■□□□□ 0.93
XRCC2O43543 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
XRCC2O43543 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.84■□□□□ 0.93
XRCC2O43543 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRCC2O43543 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRCC2O43543 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRCC2O43543 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
XRCC2O43543 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.83■□□□□ 0.93
XRCC2O43543 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.83■□□□□ 0.93
XRCC2O43543 GPX1-201ENST00000419349 1106 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms