Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.08■■■□□ 2.573e-6■■□□□ 12.5
EIF3DO15371 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.72■■■□□ 2.193e-6■■□□□ 12.5
EIF3DO15371 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.113e-6■■□□□ 12.5
EIF3DO15371 PQLC1-206ENST00000474967 2319 ntTSL 521.71■■□□□ 1.073e-6■■□□□ 12.5
EIF3DO15371 PQLC1-201ENST00000351365 2414 ntTSL 219.98■□□□□ 0.793e-6■■□□□ 12.5
EIF3DO15371 PQLC1-204ENST00000466449 2887 ntTSL 218.46■□□□□ 0.553e-6■■□□□ 12.5
EIF3DO15371 PQLC1-212ENST00000590895 865 ntTSL 317.94■□□□□ 0.463e-6■■□□□ 12.5
EIF3DO15371 PQLC1-205ENST00000469369 593 ntTSL 414.48□□□□□ -0.093e-6■■□□□ 12.5
EIF3DO15371 PQLC1-209ENST00000589000 558 ntTSL 412.28□□□□□ -0.443e-6■■□□□ 12.5
EIF3DO15371 BPTF-206ENST00000467104 550 ntTSL 23.35□□□□□ -1.872e-6■■□□□ 12.5
EIF3DO15371 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.291e-10■■□□□ 12.5
EIF3DO15371 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.041e-10■■□□□ 12.5
EIF3DO15371 MLLT10-215ENST00000495130 744 ntTSL 313.35□□□□□ -0.271e-10■■□□□ 12.5
EIF3DO15371 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.141e-10■■□□□ 12.5
EIF3DO15371 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.311e-10■■□□□ 12.5
EIF3DO15371 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.52□□□□□ -1.374e-6■■□□□ 12.5
EIF3DO15371 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.694e-6■■□□□ 12.5
EIF3DO15371 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.89■■□□□ 1.252e-18■■□□□ 12.5
EIF3DO15371 DBI-205ENST00000460901 774 ntTSL 1 (best)19.07■□□□□ 0.642e-18■■□□□ 12.5
EIF3DO15371 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.92■□□□□ 0.622e-18■■□□□ 12.5
EIF3DO15371 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.69■□□□□ 0.422e-18■■□□□ 12.5
EIF3DO15371 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.8■□□□□ 0.282e-18■■□□□ 12.5
EIF3DO15371 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.222e-18■■□□□ 12.5
EIF3DO15371 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC12.87□□□□□ -0.352e-18■■□□□ 12.5
EIF3DO15371 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.412e-18■■□□□ 12.5
EIF3DO15371 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC12.39□□□□□ -0.432e-18■■□□□ 12.5
EIF3DO15371 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC11.02□□□□□ -0.652e-18■■□□□ 12.5
EIF3DO15371 DBI-207ENST00000492375 784 ntTSL 29.49□□□□□ -0.892e-18■■□□□ 12.5
EIF3DO15371 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.25■□□□□ 0.511e-6■■□□□ 12.5
EIF3DO15371 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.181e-6■■□□□ 12.5
EIF3DO15371 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC13.62□□□□□ -0.231e-6■■□□□ 12.5
EIF3DO15371 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC12.77□□□□□ -0.371e-6■■□□□ 12.5
EIF3DO15371 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.833e-6■■□□□ 12.4
EIF3DO15371 P3H1-203ENST00000372526 654 ntTSL 319.42■□□□□ 0.73e-6■■□□□ 12.4
EIF3DO15371 P3H1-207ENST00000460031 2726 ntTSL 518.52■□□□□ 0.563e-6■■□□□ 12.4
EIF3DO15371 P3H1-214ENST00000495874 2813 ntTSL 217.36■□□□□ 0.373e-6■■□□□ 12.4
EIF3DO15371 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.343e-6■■□□□ 12.4
EIF3DO15371 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.273e-6■■□□□ 12.4
EIF3DO15371 P3H1-213ENST00000492956 3001 ntTSL 1 (best)15.05■□□□□ -03e-6■■□□□ 12.4
EIF3DO15371 USP34-202ENST00000411912 4309 ntTSL 54.19□□□□□ -1.743e-6■■□□□ 12.4
EIF3DO15371 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.11□□□□□ -0.315e-7■■□□□ 12.4
EIF3DO15371 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.71□□□□□ -0.855e-7■■□□□ 12.4
EIF3DO15371 C20orf204-201ENST00000358393 1466 ntTSL 227.39■■□□□ 1.984e-6■■□□□ 12.4
EIF3DO15371 PKD1-211ENST00000474088 923 ntTSL 526.53■■□□□ 1.847e-12■■□□□ 12.4
EIF3DO15371 TMEM98-201ENST00000261713 826 ntTSL 325.61■■□□□ 1.698e-9■■□□□ 12.4
EIF3DO15371 TMEM98-203ENST00000395149 808 ntTSL 225.37■■□□□ 1.658e-9■■□□□ 12.4
EIF3DO15371 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.658e-9■■□□□ 12.4
EIF3DO15371 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)24.67■■□□□ 1.544e-6■■□□□ 12.4
EIF3DO15371 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.098e-9■■□□□ 12.4
EIF3DO15371 CHD4-213ENST00000545584 553 ntTSL 421.41■■□□□ 1.028e-9■■□□□ 12.4
EIF3DO15371 MT1F-202ENST00000564295 1573 nt20.08■□□□□ 0.84e-6■■□□□ 12.4
EIF3DO15371 RIOK1-203ENST00000475351 960 ntTSL 1 (best)19.04■□□□□ 0.644e-6■■□□□ 12.4
EIF3DO15371 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.614e-6■■□□□ 12.4
EIF3DO15371 SHANK2-207ENST00000425049 557 ntTSL 417.89■□□□□ 0.458e-9■■□□□ 12.4
EIF3DO15371 SHANK2-213ENST00000460048 736 ntTSL 517.86■□□□□ 0.458e-9■■□□□ 12.4
EIF3DO15371 LARP1-215ENST00000524248 2128 ntTSL 517.75■□□□□ 0.434e-6■■□□□ 12.4
EIF3DO15371 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.234e-6■■□□□ 12.4
EIF3DO15371 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.9■□□□□ 0.147e-12■■□□□ 12.4
EIF3DO15371 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.084e-6■■□□□ 12.4
EIF3DO15371 EEF1D-240ENST00000531770 589 ntTSL 415.48■□□□□ 0.074e-6■■□□□ 12.4
EIF3DO15371 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.1■□□□□ 0.018e-9■■□□□ 12.4
EIF3DO15371 TMEM98-208ENST00000583120 504 ntTSL 214.7□□□□□ -0.068e-9■■□□□ 12.4
EIF3DO15371 TMEM98-209ENST00000583437 776 ntTSL 314.7□□□□□ -0.068e-9■■□□□ 12.4
EIF3DO15371 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.084e-6■■□□□ 12.4
EIF3DO15371 TMEM98-207ENST00000582227 424 ntTSL 514.3□□□□□ -0.128e-9■■□□□ 12.4
EIF3DO15371 TMEM98-204ENST00000439138 896 ntTSL 313.64□□□□□ -0.238e-9■■□□□ 12.4
EIF3DO15371 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.324e-6■■□□□ 12.4
EIF3DO15371 MT1F-204ENST00000568475 416 ntTSL 2 BASIC12.63□□□□□ -0.394e-6■■□□□ 12.4
EIF3DO15371 ACTR1A-207ENST00000636707 1046 ntTSL 512.47□□□□□ -0.414e-6■■□□□ 12.4
EIF3DO15371 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC12.32□□□□□ -0.444e-6■■□□□ 12.4
EIF3DO15371 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC12□□□□□ -0.494e-6■■□□□ 12.4
EIF3DO15371 SUPT6H-212ENST00000585230 567 ntTSL 411.82□□□□□ -0.524e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-206ENST00000504275 479 ntTSL 310.59□□□□□ -0.714e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-208ENST00000507921 1516 ntTSL 210.58□□□□□ -0.724e-6■■□□□ 12.4
EIF3DO15371 SERPINC1-201ENST00000367698 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.764e-6■■□□□ 12.4
EIF3DO15371 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.794e-6■■□□□ 12.4
EIF3DO15371 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.844e-6■■□□□ 12.4
EIF3DO15371 ACTR1A-204ENST00000481044 689 ntTSL 29.72□□□□□ -0.854e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.964e-6■■□□□ 12.4
EIF3DO15371 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC9□□□□□ -0.974e-6■■□□□ 12.4
EIF3DO15371 LARP1-213ENST00000523163 843 ntTSL 58.55□□□□□ -1.044e-6■■□□□ 12.4
EIF3DO15371 SUPT6H-207ENST00000581908 679 ntTSL 37.94□□□□□ -1.144e-6■■□□□ 12.4
EIF3DO15371 LARP1-207ENST00000518742 587 ntTSL 57.45□□□□□ -1.224e-6■■□□□ 12.4
EIF3DO15371 LARP1-205ENST00000518595 773 ntTSL 27.45□□□□□ -1.224e-6■■□□□ 12.4
EIF3DO15371 SERPINC1-203ENST00000494024 669 ntTSL 37.3□□□□□ -1.244e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-214ENST00000515845 505 ntTSL 36.73□□□□□ -1.334e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.774e-6■■□□□ 12.4
EIF3DO15371 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.794e-6■■□□□ 12.4
EIF3DO15371 LZTS2-207ENST00000489526 802 ntTSL 221.06■□□□□ 0.962e-6■■□□□ 12.3
EIF3DO15371 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.71■□□□□ 0.912e-6■■□□□ 12.3
EIF3DO15371 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.822e-6■■□□□ 12.3
EIF3DO15371 LZTS2-204ENST00000429732 701 ntTSL 518.63■□□□□ 0.572e-6■■□□□ 12.3
EIF3DO15371 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.422e-6■■□□□ 12.3
EIF3DO15371 LZTS2-203ENST00000426584 816 ntTSL 317.54■□□□□ 0.42e-6■■□□□ 12.3
EIF3DO15371 LZTS2-206ENST00000481129 745 ntTSL 315.06■□□□□ 02e-6■■□□□ 12.3
EIF3DO15371 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.12e-6■■□□□ 12.3
EIF3DO15371 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC11.76□□□□□ -0.532e-6■■□□□ 12.3
EIF3DO15371 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.632e-6■■□□□ 12.3
EIF3DO15371 HK2-203ENST00000472302 395 ntTSL 34.43□□□□□ -1.72e-6■■□□□ 12.3
EIF3DO15371 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.93□□□□□ -1.782e-6■■□□□ 12.3
Retrieved 100 of 4,069 protein–RNA pairs in 102.7 ms