Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SOX1O00570 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SOX1O00570 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SOX1O00570 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.48■■□□□ 1.83
SOX1O00570 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SOX1O00570 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SOX1O00570 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SOX1O00570 AL031432.3-201ENST00000607698 485 ntBASIC26.47■■□□□ 1.83
SOX1O00570 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SOX1O00570 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SOX1O00570 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.47■■□□□ 1.83
SOX1O00570 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SOX1O00570 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.46■■□□□ 1.83
SOX1O00570 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.46■■□□□ 1.83
SOX1O00570 AL512631.2-201ENST00000604634 923 ntBASIC26.46■■□□□ 1.83
SOX1O00570 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SOX1O00570 AL356740.2-201ENST00000601559 647 ntBASIC26.45■■□□□ 1.82
SOX1O00570 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SOX1O00570 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.45■■□□□ 1.82
SOX1O00570 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SOX1O00570 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SOX1O00570 SUDS3P1-201ENST00000505831 966 ntBASIC26.44■■□□□ 1.82
SOX1O00570 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.44■■□□□ 1.82
SOX1O00570 AC010997.5-201ENST00000609182 354 ntBASIC26.44■■□□□ 1.82
SOX1O00570 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SOX1O00570 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.43■■□□□ 1.82
SOX1O00570 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SOX1O00570 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.43■■□□□ 1.82
SOX1O00570 AC022616.5-201ENST00000518796 181 ntBASIC26.43■■□□□ 1.82
SOX1O00570 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.43■■□□□ 1.82
SOX1O00570 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.43■■□□□ 1.82
SOX1O00570 MIR6724-1-201ENST00000616420 92 ntBASIC26.43■■□□□ 1.82
SOX1O00570 MIR6724-2-201ENST00000616483 92 ntBASIC26.43■■□□□ 1.82
SOX1O00570 MIR6724-4-201ENST00000617390 92 ntBASIC26.43■■□□□ 1.82
SOX1O00570 MIR6724-3-201ENST00000622482 92 ntBASIC26.43■■□□□ 1.82
SOX1O00570 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.43■■□□□ 1.82
SOX1O00570 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SOX1O00570 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.42■■□□□ 1.82
SOX1O00570 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SOX1O00570 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SOX1O00570 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SOX1O00570 AL162430.1-201ENST00000480705 870 ntBASIC26.41■■□□□ 1.82
SOX1O00570 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SOX1O00570 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SOX1O00570 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.4■■□□□ 1.82
SOX1O00570 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.4■■□□□ 1.82
SOX1O00570 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.4■■□□□ 1.82
SOX1O00570 MIR6821-201ENST00000617625 74 ntBASIC26.4■■□□□ 1.82
SOX1O00570 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SOX1O00570 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SOX1O00570 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SOX1O00570 AL135925.1-201ENST00000605920 1701 ntBASIC26.39■■□□□ 1.82
SOX1O00570 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SOX1O00570 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.39■■□□□ 1.82
SOX1O00570 AC090192.1-201ENST00000517740 490 ntBASIC26.39■■□□□ 1.82
SOX1O00570 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SOX1O00570 AL359504.2-201ENST00000605506 1601 ntBASIC26.39■■□□□ 1.81
SOX1O00570 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SOX1O00570 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SOX1O00570 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SOX1O00570 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.37■■□□□ 1.81
SOX1O00570 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SOX1O00570 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SOX1O00570 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.36■■□□□ 1.81
SOX1O00570 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.36■■□□□ 1.81
SOX1O00570 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SOX1O00570 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.36■■□□□ 1.81
SOX1O00570 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.35■■□□□ 1.81
SOX1O00570 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SOX1O00570 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SOX1O00570 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SOX1O00570 AC120024.1-201ENST00000562672 995 ntBASIC26.34■■□□□ 1.81
SOX1O00570 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SOX1O00570 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SOX1O00570 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.33■■□□□ 1.81
SOX1O00570 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.33■■□□□ 1.81
SOX1O00570 AC087623.3-201ENST00000607047 1098 ntBASIC26.33■■□□□ 1.81
SOX1O00570 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.33■■□□□ 1.81
SOX1O00570 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.33■■□□□ 1.81
SOX1O00570 RARRES2P11-201ENST00000635158 484 ntBASIC26.33■■□□□ 1.81
SOX1O00570 AC105265.2-201ENST00000467189 838 ntBASIC26.32■■□□□ 1.8
SOX1O00570 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SOX1O00570 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.32■■□□□ 1.8
SOX1O00570 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.32■■□□□ 1.8
SOX1O00570 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SOX1O00570 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SOX1O00570 AC097381.1-201ENST00000429019 1296 ntBASIC26.31■■□□□ 1.8
SOX1O00570 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.31■■□□□ 1.8
SOX1O00570 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SOX1O00570 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms