Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PIK3C2AO00443 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 RNF146-205ENST00000477776 762 ntTSL 3 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 TK2-216ENST00000564917 1156 ntTSL 3 BASIC33.13■■■□□ 2.89
PIK3C2AO00443 LINC01003-201ENST00000564834 1764 ntBASIC33.12■■■□□ 2.89
PIK3C2AO00443 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC33.12■■■□□ 2.89
PIK3C2AO00443 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
PIK3C2AO00443 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
PIK3C2AO00443 AL356441.2-201ENST00000443009 864 ntBASIC33.1■■■□□ 2.89
PIK3C2AO00443 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
PIK3C2AO00443 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
PIK3C2AO00443 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
PIK3C2AO00443 LONRF2P2-201ENST00000439212 571 ntBASIC33.09■■■□□ 2.89
PIK3C2AO00443 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC33.09■■■□□ 2.89
PIK3C2AO00443 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
PIK3C2AO00443 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PIK3C2AO00443 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33.07■■■□□ 2.89
PIK3C2AO00443 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC33.07■■■□□ 2.89
PIK3C2AO00443 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
PIK3C2AO00443 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC33.07■■■□□ 2.89
PIK3C2AO00443 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
PIK3C2AO00443 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
PIK3C2AO00443 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PIK3C2AO00443 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PIK3C2AO00443 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PIK3C2AO00443 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC33.06■■■□□ 2.88
PIK3C2AO00443 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC33.06■■■□□ 2.88
PIK3C2AO00443 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC33.06■■■□□ 2.88
PIK3C2AO00443 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC33.06■■■□□ 2.88
PIK3C2AO00443 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
PIK3C2AO00443 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC33.05■■■□□ 2.88
PIK3C2AO00443 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
PIK3C2AO00443 Z92544.1-202ENST00000571933 1220 ntBASIC33.04■■■□□ 2.88
PIK3C2AO00443 AC019069.1-201ENST00000610008 1333 ntBASIC33.04■■■□□ 2.88
PIK3C2AO00443 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
PIK3C2AO00443 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
PIK3C2AO00443 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.04■■■□□ 2.88
PIK3C2AO00443 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
PIK3C2AO00443 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
PIK3C2AO00443 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC33.02■■■□□ 2.88
PIK3C2AO00443 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
PIK3C2AO00443 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
PIK3C2AO00443 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
PIK3C2AO00443 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC33.02■■■□□ 2.88
PIK3C2AO00443 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
PIK3C2AO00443 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PIK3C2AO00443 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC33.01■■■□□ 2.88
PIK3C2AO00443 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.88
PIK3C2AO00443 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
PIK3C2AO00443 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PIK3C2AO00443 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
PIK3C2AO00443 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PIK3C2AO00443 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC33.01■■■□□ 2.87
PIK3C2AO00443 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC33.01■■■□□ 2.87
PIK3C2AO00443 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PIK3C2AO00443 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC33■■■□□ 2.87
PIK3C2AO00443 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC33■■■□□ 2.87
PIK3C2AO00443 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33■■■□□ 2.87
PIK3C2AO00443 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
PIK3C2AO00443 CREM-229ENST00000474362 1030 ntTSL 2 BASIC33■■■□□ 2.87
PIK3C2AO00443 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC33■■■□□ 2.87
PIK3C2AO00443 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
PIK3C2AO00443 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PIK3C2AO00443 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
PIK3C2AO00443 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.99■■■□□ 2.87
PIK3C2AO00443 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.99■■■□□ 2.87
PIK3C2AO00443 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PIK3C2AO00443 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.98■■■□□ 2.87
PIK3C2AO00443 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.98■■■□□ 2.87
PIK3C2AO00443 AC239859.2-201ENST00000444165 318 ntBASIC32.97■■■□□ 2.87
PIK3C2AO00443 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.97■■■□□ 2.87
PIK3C2AO00443 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC32.97■■■□□ 2.87
PIK3C2AO00443 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
PIK3C2AO00443 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PIK3C2AO00443 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
PIK3C2AO00443 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.94■■■□□ 2.86
PIK3C2AO00443 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.94■■■□□ 2.86
PIK3C2AO00443 AC142472.1-201ENST00000612013 1741 ntBASIC32.94■■■□□ 2.86
PIK3C2AO00443 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
PIK3C2AO00443 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PIK3C2AO00443 AC139426.1-201ENST00000568218 2529 ntBASIC32.93■■■□□ 2.86
PIK3C2AO00443 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PIK3C2AO00443 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.93■■■□□ 2.86
PIK3C2AO00443 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.92■■■□□ 2.86
PIK3C2AO00443 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.92■■■□□ 2.86
PIK3C2AO00443 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PIK3C2AO00443 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.91■■■□□ 2.86
PIK3C2AO00443 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
PIK3C2AO00443 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
PIK3C2AO00443 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
PIK3C2AO00443 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
PIK3C2AO00443 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms