Protein–RNA interactions for Protein: E9PJ23

NPIPB6, Nuclear pore complex-interacting protein family member B6, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB6E9PJ23 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L13-201ENST00000554103 1267 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L15-201ENST00000611059 1267 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L23-201ENST00000615195 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L24-201ENST00000617576 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L22-201ENST00000618238 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L20-201ENST00000619712 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L21-201ENST00000622058 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L10-201ENST00000622460 1267 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 DUX4L25-201ENST00000624915 1269 ntBASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB6E9PJ23 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
NPIPB6E9PJ23 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB6E9PJ23 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.33■□□□□ 0.53
NPIPB6E9PJ23 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB6E9PJ23 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB6E9PJ23 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB6E9PJ23 AC010501.1-201ENST00000606270 1962 ntBASIC18.33■□□□□ 0.52
NPIPB6E9PJ23 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB6E9PJ23 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 AC008813.1-201ENST00000536597 885 ntBASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB6E9PJ23 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB6E9PJ23 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB6E9PJ23 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 AL139125.2-201ENST00000623134 1869 ntBASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB6E9PJ23 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 DUX4L11-201ENST00000611504 1267 ntBASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 DUX4L12-201ENST00000614593 1267 ntBASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 DUX4L14-201ENST00000621227 1267 ntBASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB6E9PJ23 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPB6E9PJ23 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NPIPB6E9PJ23 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 AC148477.6-201ENST00000623746 465 ntBASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPB6E9PJ23 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NPIPB6E9PJ23 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms