Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.7■□□□□ 0.74
LINC00473A8K010 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00473A8K010 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00473A8K010 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00473A8K010 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LINC00473A8K010 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00473A8K010 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LINC00473A8K010 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00473A8K010 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00473A8K010 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00473A8K010 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00473A8K010 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC00473A8K010 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LINC00473A8K010 AC016575.1-201ENST00000607026 382 ntBASIC19.68■□□□□ 0.74
LINC00473A8K010 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00473A8K010 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.68■□□□□ 0.74
LINC00473A8K010 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00473A8K010 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00473A8K010 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC00473A8K010 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINC00473A8K010 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00473A8K010 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
LINC00473A8K010 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00473A8K010 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00473A8K010 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00473A8K010 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00473A8K010 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.66■□□□□ 0.74
LINC00473A8K010 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LINC00473A8K010 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LINC00473A8K010 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LINC00473A8K010 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00473A8K010 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
LINC00473A8K010 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.65■□□□□ 0.74
LINC00473A8K010 AC126177.7-201ENST00000547904 679 ntBASIC19.65■□□□□ 0.74
LINC00473A8K010 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00473A8K010 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.65■□□□□ 0.74
LINC00473A8K010 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00473A8K010 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.65■□□□□ 0.74
LINC00473A8K010 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00473A8K010 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINC00473A8K010 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LINC00473A8K010 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00473A8K010 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC00473A8K010 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00473A8K010 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00473A8K010 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00473A8K010 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
LINC00473A8K010 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00473A8K010 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00473A8K010 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINC00473A8K010 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00473A8K010 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00473A8K010 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00473A8K010 AC022211.4-201ENST00000625094 2161 ntBASIC19.62■□□□□ 0.73
LINC00473A8K010 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00473A8K010 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC00473A8K010 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LINC00473A8K010 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.62■□□□□ 0.73
LINC00473A8K010 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00473A8K010 AC142381.3-201ENST00000568208 1670 ntBASIC19.62■□□□□ 0.73
LINC00473A8K010 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00473A8K010 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 AC093323.1-202ENST00000635031 2045 ntBASIC19.61■□□□□ 0.73
LINC00473A8K010 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC00473A8K010 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.61■□□□□ 0.73
LINC00473A8K010 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00473A8K010 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00473A8K010 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00473A8K010 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00473A8K010 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.6■□□□□ 0.73
LINC00473A8K010 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00473A8K010 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00473A8K010 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC00473A8K010 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LINC00473A8K010 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00473A8K010 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC00473A8K010 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00473A8K010 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00473A8K010 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00473A8K010 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC00473A8K010 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00473A8K010 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00473A8K010 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00473A8K010 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC00473A8K010 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms