Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 AC133561.1-201ENST00000568600 2415 ntBASIC20.61■□□□□ 0.89
MEIS3P1A6NDR6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MEIS3P1A6NDR6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MEIS3P1A6NDR6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MEIS3P1A6NDR6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
MEIS3P1A6NDR6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.59■□□□□ 0.89
MEIS3P1A6NDR6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MEIS3P1A6NDR6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MEIS3P1A6NDR6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MEIS3P1A6NDR6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.58■□□□□ 0.88
MEIS3P1A6NDR6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.58■□□□□ 0.88
MEIS3P1A6NDR6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
MEIS3P1A6NDR6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.56■□□□□ 0.88
MEIS3P1A6NDR6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MEIS3P1A6NDR6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.56■□□□□ 0.88
MEIS3P1A6NDR6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MEIS3P1A6NDR6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 AC096887.2-201ENST00000623443 1957 ntBASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MEIS3P1A6NDR6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.54■□□□□ 0.88
MEIS3P1A6NDR6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MEIS3P1A6NDR6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.54■□□□□ 0.88
MEIS3P1A6NDR6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MEIS3P1A6NDR6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.54■□□□□ 0.88
MEIS3P1A6NDR6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MEIS3P1A6NDR6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MEIS3P1A6NDR6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MEIS3P1A6NDR6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MEIS3P1A6NDR6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.53■□□□□ 0.88
MEIS3P1A6NDR6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MEIS3P1A6NDR6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.52■□□□□ 0.88
MEIS3P1A6NDR6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MEIS3P1A6NDR6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MEIS3P1A6NDR6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.52■□□□□ 0.87
MEIS3P1A6NDR6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
MEIS3P1A6NDR6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MEIS3P1A6NDR6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MEIS3P1A6NDR6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.49■□□□□ 0.87
MEIS3P1A6NDR6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 LINC01124-201ENST00000409786 2117 ntBASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MEIS3P1A6NDR6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms