Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 AL157400.5-201ENST00000507624 621 ntBASIC22.27■■□□□ 1.16
CDHR4A6H8M9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR4A6H8M9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR4A6H8M9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR4A6H8M9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR4A6H8M9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.24■■□□□ 1.15
CDHR4A6H8M9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR4A6H8M9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.24■■□□□ 1.15
CDHR4A6H8M9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDHR4A6H8M9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR4A6H8M9 AC096887.2-201ENST00000623443 1957 ntBASIC22.21■■□□□ 1.15
CDHR4A6H8M9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.21■■□□□ 1.15
CDHR4A6H8M9 AC025884.2-201ENST00000553429 711 ntBASIC22.21■■□□□ 1.15
CDHR4A6H8M9 AC092296.2-201ENST00000589470 999 ntBASIC22.21■■□□□ 1.15
CDHR4A6H8M9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDHR4A6H8M9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR4A6H8M9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CDHR4A6H8M9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.2■■□□□ 1.14
CDHR4A6H8M9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR4A6H8M9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.2■■□□□ 1.14
CDHR4A6H8M9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
CDHR4A6H8M9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.19■■□□□ 1.14
CDHR4A6H8M9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR4A6H8M9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR4A6H8M9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR4A6H8M9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR4A6H8M9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 MIR4449-201ENST00000578365 66 ntBASIC22.18■■□□□ 1.14
CDHR4A6H8M9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR4A6H8M9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR4A6H8M9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.16■■□□□ 1.14
CDHR4A6H8M9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.16■■□□□ 1.14
CDHR4A6H8M9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR4A6H8M9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.16■■□□□ 1.14
CDHR4A6H8M9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR4A6H8M9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR4A6H8M9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CDHR4A6H8M9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR4A6H8M9 SMPD5-203ENST00000639008 1464 ntBASIC22.15■■□□□ 1.14
CDHR4A6H8M9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
CDHR4A6H8M9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDHR4A6H8M9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.14■■□□□ 1.13
CDHR4A6H8M9 MIR3960-201ENST00000583311 91 ntBASIC22.14■■□□□ 1.13
CDHR4A6H8M9 AC022413.1-201ENST00000624602 984 ntBASIC22.14■■□□□ 1.13
CDHR4A6H8M9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.14■■□□□ 1.13
CDHR4A6H8M9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR4A6H8M9 ECEL1P2-201ENST00000461596 1295 ntBASIC22.13■■□□□ 1.13
CDHR4A6H8M9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR4A6H8M9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CDHR4A6H8M9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.12■■□□□ 1.13
CDHR4A6H8M9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.12■■□□□ 1.13
CDHR4A6H8M9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms