Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 DUX4L29-201ENST00000425409 679 ntBASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C13orf42A0A1B0GVH6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C13orf42A0A1B0GVH6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 AL139125.2-201ENST00000623134 1869 ntBASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 AC142472.1-201ENST00000612013 1741 ntBASIC20.21■□□□□ 0.83
C13orf42A0A1B0GVH6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 WHAMMP2-203ENST00000563942 1603 ntBASIC20.2■□□□□ 0.82
C13orf42A0A1B0GVH6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C13orf42A0A1B0GVH6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 AC138932.3-201ENST00000567634 1902 ntBASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C13orf42A0A1B0GVH6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 AC022211.4-201ENST00000625094 2161 ntBASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C13orf42A0A1B0GVH6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C13orf42A0A1B0GVH6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
C13orf42A0A1B0GVH6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C13orf42A0A1B0GVH6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.15■□□□□ 0.82
C13orf42A0A1B0GVH6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.15■□□□□ 0.82
C13orf42A0A1B0GVH6 AC010501.1-201ENST00000606270 1962 ntBASIC20.15■□□□□ 0.82
C13orf42A0A1B0GVH6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
C13orf42A0A1B0GVH6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C13orf42A0A1B0GVH6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
C13orf42A0A1B0GVH6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C13orf42A0A1B0GVH6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C13orf42A0A1B0GVH6 AC021231.2-201ENST00000594613 730 ntBASIC20.14■□□□□ 0.81
C13orf42A0A1B0GVH6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C13orf42A0A1B0GVH6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.14■□□□□ 0.81
C13orf42A0A1B0GVH6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C13orf42A0A1B0GVH6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
C13orf42A0A1B0GVH6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms