Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV6A0A075B6T7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV6A0A075B6T7 LINC01124-201ENST00000409786 2117 ntBASIC20.62■□□□□ 0.89
TRAV6A0A075B6T7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV6A0A075B6T7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV6A0A075B6T7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV6A0A075B6T7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 AC135983.2-203ENST00000454486 1613 ntBASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV6A0A075B6T7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRAV6A0A075B6T7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
TRAV6A0A075B6T7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV6A0A075B6T7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV6A0A075B6T7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAV6A0A075B6T7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV6A0A075B6T7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV6A0A075B6T7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV6A0A075B6T7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 AC097639.1-201ENST00000565519 1891 ntBASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV6A0A075B6T7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV6A0A075B6T7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV6A0A075B6T7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 WHAMMP2-203ENST00000563942 1603 ntBASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV6A0A075B6T7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV6A0A075B6T7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV6A0A075B6T7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRAV6A0A075B6T7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV6A0A075B6T7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV6A0A075B6T7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV6A0A075B6T7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV6A0A075B6T7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRAV6A0A075B6T7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TRAV6A0A075B6T7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV6A0A075B6T7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV6A0A075B6T7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms