Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 AL603756.1-201ENST00000606511 2163 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 TERF1P1-201ENST00000311003 1181 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 AC112907.2-201ENST00000448639 330 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 KRT18P38-201ENST00000449496 1282 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 AC124947.2-201ENST00000547118 1133 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 RNF126P1-202ENST00000569893 925 ntBASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPS28Q9Y2Q9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 AC092068.3-201ENST00000587894 2016 ntBASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 AC111152.3-201ENST00000569699 673 ntBASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPS28Q9Y2Q9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 RNF216P1-203ENST00000404404 2427 ntBASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
MRPS28Q9Y2Q9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms