Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 Z85996.1-201ENST00000494644 937 ntBASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 AC022532.1-201ENST00000624563 1728 ntBASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AL353807.1-201ENST00000427475 662 ntBASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC233702.5-201ENST00000584107 538 ntBASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC116407.2-201ENST00000613639 860 ntBASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH1Q9Y2L9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AL009178.2-201ENST00000597278 2719 ntBASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 RPS2P55-201ENST00000397318 883 ntBASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AC107956.1-201ENST00000494359 873 ntBASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AC132938.6-201ENST00000623828 1655 ntBASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms