Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 VENTXP5-201ENST00000523979 775 ntBASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AC083849.1-201ENST00000615227 514 ntBASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 Z83836.1-201ENST00000624605 1642 ntBASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AC087388.1-201ENST00000571370 1112 ntBASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 NTF6B-201ENST00000591913 560 ntBASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AC132872.4-202ENST00000622924 2756 ntBASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.66□□□□□ -0.38
HHLA3Q9XRX5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 AC005052.1-201ENST00000625181 2492 ntBASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.65□□□□□ -0.38
HHLA3Q9XRX5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms