Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 AC064862.7-201ENST00000604520 867 ntBASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 AL773604.1-201ENST00000617417 272 ntBASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 AL022326.1-202ENST00000641533 845 ntBASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 AC133963.1-201ENST00000504166 1679 ntBASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 AL023806.1-201ENST00000603994 1649 ntBASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT6Q9ULM6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 AL031284.1-201ENST00000419297 478 ntBASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 RPS2P1-201ENST00000434010 821 ntBASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 AL139327.4-201ENST00000612362 153 ntBASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 FAM215A-202ENST00000632077 792 ntBASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 AP001094.4-201ENST00000579008 2176 ntBASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT6Q9ULM6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 AL049840.3-201ENST00000602669 611 ntBASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT6Q9ULM6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT6Q9ULM6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms