Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDE1Q9NXR1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 AC092865.7-201ENST00000641832 219 ntBASIC16.74■□□□□ 0.27
NDE1Q9NXR1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 AL136379.1-201ENST00000623471 2642 ntBASIC16.74■□□□□ 0.27
NDE1Q9NXR1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDE1Q9NXR1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC006058.3-201ENST00000606217 1069 ntBASIC16.73■□□□□ 0.27
NDE1Q9NXR1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NDE1Q9NXR1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 AC002558.1-201ENST00000488906 803 ntBASIC16.72■□□□□ 0.27
NDE1Q9NXR1 RPPH1-201ENST00000516869 333 ntBASIC16.72■□□□□ 0.27
NDE1Q9NXR1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDE1Q9NXR1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms