Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 AC009831.1-201ENST00000580420 1582 ntBASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PEG13-201ENST00000631594 5667 ntBASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 RNF216P1-203ENST00000404404 2427 ntBASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CDC42SE1Q9NRR8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms