Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PCED1CP-201ENST00000419887 785 ntBASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AP002383.4-201ENST00000442518 975 ntBASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AC009336.1-201ENST00000608941 1553 ntBASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.71■□□□□ 0.58
NLRC4Q9NPP4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
NLRC4Q9NPP4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 TPSP2-201ENST00000561760 610 ntBASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 AC087388.1-201ENST00000571370 1112 ntBASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NLRC4Q9NPP4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 TOB2P1-201ENST00000469761 992 ntBASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 AP002414.4-201ENST00000589764 1148 ntBASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms