Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 AC004890.2-204ENST00000481968 304 ntBASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PLXNA4Q9HCM2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 LINC01225-203ENST00000563550 1244 ntBASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 AP000842.3-202ENST00000569238 1080 ntBASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.02■□□□□ 0.48
PLXNA4Q9HCM2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PLXNA4Q9HCM2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 AC244107.1-201ENST00000442033 332 ntBASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PLXNA4Q9HCM2 AL353732.1-201ENST00000569618 1459 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AC100757.3-201ENST00000622361 1406 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 BASP1P1-201ENST00000430708 665 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 TERF1P3-201ENST00000505638 1227 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AP005018.1-201ENST00000525475 301 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AC027307.2-201ENST00000591252 911 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 NOC2LP1-202ENST00000452600 2235 ntBASIC18■□□□□ 0.47
PLXNA4Q9HCM2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
PLXNA4Q9HCM2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms