Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VAT1LQ9HCJ6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
VAT1LQ9HCJ6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VAT1LQ9HCJ6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.98■□□□□ 0.79
VAT1LQ9HCJ6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
VAT1LQ9HCJ6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 AC140113.2-201ENST00000604370 208 ntBASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
VAT1LQ9HCJ6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 PMS2P1-201ENST00000431037 1228 ntBASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 AC108073.2-201ENST00000464002 357 ntBASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 IGHV3-65-201ENST00000523210 341 ntBASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 AC008667.4-201ENST00000607370 168 ntBASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 PCDHB18P-201ENST00000524813 2368 ntBASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
VAT1LQ9HCJ6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.95■□□□□ 0.79
VAT1LQ9HCJ6 AL138688.1-201ENST00000624851 1594 ntBASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 CROCCP2-202ENST00000412962 2773 ntBASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 AC027601.4-201ENST00000611259 610 ntBASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VAT1LQ9HCJ6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 MED15P5-201ENST00000423150 992 ntBASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 MIR4751-201ENST00000578027 74 ntBASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 AL805961.1-202ENST00000641562 540 ntBASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VAT1LQ9HCJ6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms