Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 KLF4P1-201ENST00000412782 1185 ntBASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AC073592.5-201ENST00000624854 528 ntBASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AC006449.5-201ENST00000610658 2098 ntBASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TUBB1Q9H4B7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AL645728.1-201ENST00000366221 2101 ntBASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 BX276092.5-203ENST00000456199 560 ntBASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 FAM86EP-206ENST00000510506 987 ntBASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AL121956.5-201ENST00000625261 221 ntBASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 AL662844.4-201ENST00000606367 2838 ntBASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB1Q9H4B7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 AL121672.3-201ENST00000608644 468 ntBASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB1Q9H4B7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms