Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 HMGA1P7-201ENST00000406908 502 ntBASIC18.73■□□□□ 0.59
HIPK3Q9H422 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 AL158211.3-201ENST00000607385 239 ntBASIC18.73■□□□□ 0.59
HIPK3Q9H422 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIPK3Q9H422 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
HIPK3Q9H422 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 AL139327.4-201ENST00000612362 153 ntBASIC18.72■□□□□ 0.59
HIPK3Q9H422 AC093503.3-201ENST00000624917 2352 ntBASIC18.72■□□□□ 0.59
HIPK3Q9H422 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 REXO1L11P-201ENST00000620964 1927 ntBASIC18.72■□□□□ 0.59
HIPK3Q9H422 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.72■□□□□ 0.59
HIPK3Q9H422 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIPK3Q9H422 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 AL009183.1-201ENST00000603760 355 ntBASIC18.71■□□□□ 0.59
HIPK3Q9H422 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms