Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA3CQ99985 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 AP001094.4-201ENST00000579008 2176 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 KRT18P67-201ENST00000432816 1264 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 AC018712.1-201ENST00000455767 687 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 AL353135.1-201ENST00000606729 504 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 AC148477.8-201ENST00000624298 468 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 EGFEM1P-202ENST00000431685 1563 ntBASIC17.49■□□□□ 0.39
SEMA3CQ99985 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SEMA3CQ99985 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA3CQ99985 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 HNRNPDP1-201ENST00000439535 754 ntBASIC17.48■□□□□ 0.39
SEMA3CQ99985 OR7E14P-202ENST00000530490 1290 ntBASIC17.48■□□□□ 0.39
SEMA3CQ99985 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 AC107918.4-202ENST00000641623 219 ntBASIC17.48■□□□□ 0.39
SEMA3CQ99985 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA3CQ99985 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.48■□□□□ 0.39
SEMA3CQ99985 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 LINC02012-201ENST00000608206 1725 ntBASIC17.47■□□□□ 0.39
SEMA3CQ99985 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA3CQ99985 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 LAGE3P1-201ENST00000425356 484 ntBASIC17.47■□□□□ 0.39
SEMA3CQ99985 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.47■□□□□ 0.39
SEMA3CQ99985 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms