Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC24■■□□□ 1.43
USP47Q96K76 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC24■■□□□ 1.43
USP47Q96K76 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24■■□□□ 1.43
USP47Q96K76 KRT18P58-201ENST00000527480 1120 ntBASIC24■■□□□ 1.43
USP47Q96K76 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC24■■□□□ 1.43
USP47Q96K76 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP47Q96K76 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP47Q96K76 ACTL9-202ENST00000612068 1252 ntBASIC24■■□□□ 1.43
USP47Q96K76 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24■■□□□ 1.43
USP47Q96K76 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC24■■□□□ 1.43
USP47Q96K76 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
USP47Q96K76 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
USP47Q96K76 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
USP47Q96K76 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
USP47Q96K76 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC23.99■■□□□ 1.43
USP47Q96K76 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.99■■□□□ 1.43
USP47Q96K76 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.99■■□□□ 1.43
USP47Q96K76 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.99■■□□□ 1.43
USP47Q96K76 AC027601.4-201ENST00000611259 610 ntBASIC23.99■■□□□ 1.43
USP47Q96K76 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.99■■□□□ 1.43
USP47Q96K76 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP47Q96K76 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC23.99■■□□□ 1.43
USP47Q96K76 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23.98■■□□□ 1.43
USP47Q96K76 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC23.98■■□□□ 1.43
USP47Q96K76 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC23.98■■□□□ 1.43
USP47Q96K76 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC23.98■■□□□ 1.43
USP47Q96K76 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
USP47Q96K76 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
USP47Q96K76 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.98■■□□□ 1.43
USP47Q96K76 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.98■■□□□ 1.43
USP47Q96K76 FAM197Y3-203ENST00000618346 717 ntBASIC23.98■■□□□ 1.43
USP47Q96K76 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.98■■□□□ 1.43
USP47Q96K76 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC23.98■■□□□ 1.43
USP47Q96K76 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.98■■□□□ 1.43
USP47Q96K76 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP47Q96K76 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC23.97■■□□□ 1.43
USP47Q96K76 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
USP47Q96K76 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.97■■□□□ 1.43
USP47Q96K76 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.97■■□□□ 1.43
USP47Q96K76 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.97■■□□□ 1.43
USP47Q96K76 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC23.97■■□□□ 1.43
USP47Q96K76 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC23.97■■□□□ 1.43
USP47Q96K76 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
USP47Q96K76 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
USP47Q96K76 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.97■■□□□ 1.43
USP47Q96K76 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC23.97■■□□□ 1.43
USP47Q96K76 KRT18P2-201ENST00000447938 1258 ntBASIC23.97■■□□□ 1.43
USP47Q96K76 POLD2P1-201ENST00000511220 997 ntBASIC23.97■■□□□ 1.43
USP47Q96K76 PGAM5P1-201ENST00000518923 814 ntBASIC23.97■■□□□ 1.43
USP47Q96K76 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
USP47Q96K76 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.97■■□□□ 1.43
USP47Q96K76 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP47Q96K76 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
USP47Q96K76 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.96■■□□□ 1.43
USP47Q96K76 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 AC080080.1-201ENST00000625121 2420 ntBASIC23.96■■□□□ 1.43
USP47Q96K76 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
USP47Q96K76 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
USP47Q96K76 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 CRYGEP-201ENST00000412192 528 ntBASIC23.96■■□□□ 1.43
USP47Q96K76 AL591424.1-201ENST00000442569 1213 ntBASIC23.96■■□□□ 1.43
USP47Q96K76 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
USP47Q96K76 AC092865.5-201ENST00000545435 363 ntBASIC23.96■■□□□ 1.43
USP47Q96K76 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
USP47Q96K76 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.96■■□□□ 1.43
USP47Q96K76 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.96■■□□□ 1.43
USP47Q96K76 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC23.96■■□□□ 1.43
USP47Q96K76 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP47Q96K76 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms