Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 MIR662-201ENST00000384847 95 ntBASIC16.43■□□□□ 0.22
LRRC58Q96CX6 STARP1-201ENST00000397973 869 ntBASIC16.43■□□□□ 0.22
LRRC58Q96CX6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.43■□□□□ 0.22
LRRC58Q96CX6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 AL441883.1-201ENST00000566170 1045 ntBASIC16.43■□□□□ 0.22
LRRC58Q96CX6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 AL513523.2-202ENST00000427283 2040 ntBASIC16.42■□□□□ 0.22
LRRC58Q96CX6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 AC007967.3-201ENST00000434308 558 ntBASIC16.42■□□□□ 0.22
LRRC58Q96CX6 AC092597.1-201ENST00000487352 616 ntBASIC16.42■□□□□ 0.22
LRRC58Q96CX6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRC58Q96CX6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.41■□□□□ 0.22
LRRC58Q96CX6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC58Q96CX6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC58Q96CX6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC58Q96CX6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC58Q96CX6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC58Q96CX6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC58Q96CX6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms