Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 GNAS-203ENST00000306120 1878 ntBASIC21.86■■□□□ 1.09
SMARCC1Q92922 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 AC004890.2-204ENST00000481968 304 ntBASIC21.86■■□□□ 1.09
SMARCC1Q92922 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 RNU1-129P-201ENST00000384064 167 ntBASIC21.85■■□□□ 1.09
SMARCC1Q92922 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 U1.21-201ENST00000580816 167 ntBASIC21.85■■□□□ 1.09
SMARCC1Q92922 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC1Q92922 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SMARCC1Q92922 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 SERBP1P5-201ENST00000510079 1181 ntBASIC21.84■■□□□ 1.09
SMARCC1Q92922 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 AL031055.1-201ENST00000606362 631 ntBASIC21.84■■□□□ 1.09
SMARCC1Q92922 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCC1Q92922 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC1Q92922 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 PIN1P1-201ENST00000412108 996 ntBASIC21.83■■□□□ 1.09
SMARCC1Q92922 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 MIR4453-201ENST00000584019 89 ntBASIC21.83■■□□□ 1.09
SMARCC1Q92922 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.83■■□□□ 1.09
SMARCC1Q92922 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC1Q92922 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC1Q92922 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC1Q92922 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC1Q92922 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC1Q92922 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.83■■□□□ 1.08
SMARCC1Q92922 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC1Q92922 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SMARCC1Q92922 AC138028.4-201ENST00000564984 1845 ntBASIC21.83■■□□□ 1.08
SMARCC1Q92922 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC1Q92922 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC1Q92922 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 AC091167.2-201ENST00000579581 588 ntBASIC21.82■■□□□ 1.08
SMARCC1Q92922 SPDYE22P-201ENST00000582158 798 ntBASIC21.82■■□□□ 1.08
SMARCC1Q92922 AC009118.2-201ENST00000613275 655 ntBASIC21.82■■□□□ 1.08
SMARCC1Q92922 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC1Q92922 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC1Q92922 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC1Q92922 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SMARCC1Q92922 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms