Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 BX005266.1-201ENST00000473402 457 ntBASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 NKAPP1-205ENST00000585790 367 ntBASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 AC099398.1-201ENST00000567919 2776 ntBASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 RBM17P3-201ENST00000417687 1192 ntBASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 AC079781.3-201ENST00000449110 356 ntBASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 PRYP5-201ENST00000451909 266 ntBASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 GPR89P-201ENST00000407924 1495 ntBASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH19Q8TAB3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 LINC00982-205ENST00000420957 435 ntBASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 MTDHP3-201ENST00000594186 672 ntBASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH19Q8TAB3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms