Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC22.64■■□□□ 1.21
COL22A1Q8NFW1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
COL22A1Q8NFW1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 TOP3BP1-201ENST00000420768 1380 ntBASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 LINC00304-203ENST00000565008 1864 ntBASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL22A1Q8NFW1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 LINC01451-201ENST00000623792 534 ntBASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 AC131009.4-201ENST00000624048 1740 ntBASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL22A1Q8NFW1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 FAM8A2P-201ENST00000528813 1142 ntBASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 AC021097.1-201ENST00000607902 574 ntBASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
COL22A1Q8NFW1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms