Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AP001094.4-201ENST00000579008 2176 ntBASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AL023806.1-201ENST00000603994 1649 ntBASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 ABCD1P5-201ENST00000445663 754 ntBASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 AC046185.3-201ENST00000623228 1824 ntBASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIMC1Q8NDZ2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AKR1C7P-201ENST00000305623 895 ntBASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 SLC25A1P3-201ENST00000395415 828 ntBASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AC091304.2-201ENST00000564639 760 ntBASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AC111152.3-201ENST00000569699 673 ntBASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIMC1Q8NDZ2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms