Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 AC026150.2-201ENST00000564693 1156 ntBASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 MIR6080-201ENST00000617359 66 ntBASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 AC129492.6-201ENST00000611383 1305 ntBASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 ATP5G2P4-201ENST00000442175 420 ntBASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFAP43Q8NDM7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CFAP43Q8NDM7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
CFAP43Q8NDM7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC26.64■■□□□ 1.85
CFAP43Q8NDM7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CFAP43Q8NDM7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AL671277.1-201ENST00000429656 993 ntBASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AC027307.3-201ENST00000594262 1100 ntBASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AL606495.2-201ENST00000605867 535 ntBASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 AL645728.2-201ENST00000641974 660 ntBASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFAP43Q8NDM7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 SPCS2P4-201ENST00000436160 681 ntBASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 AC010336.2-201ENST00000564226 506 ntBASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CFAP43Q8NDM7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 AC097493.3-201ENST00000509725 367 ntBASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFAP43Q8NDM7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms