Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 KRT18P56-201ENST00000507275 550 ntBASIC16.66■□□□□ 0.26
KRT78Q8N1N4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 AC073592.4-201ENST00000623827 446 ntBASIC16.66■□□□□ 0.26
KRT78Q8N1N4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT78Q8N1N4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.65■□□□□ 0.26
KRT78Q8N1N4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 AP001094.4-201ENST00000579008 2176 ntBASIC16.65■□□□□ 0.26
KRT78Q8N1N4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT78Q8N1N4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT78Q8N1N4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT78Q8N1N4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms