Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AC007967.4-201ENST00000614700 386 ntBASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AC116353.5-201ENST00000638148 1699 ntBASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.02■□□□□ 0.15
COL27A1Q8IZC6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 INGX-202ENST00000489074 768 ntBASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AP3S2-216ENST00000617003 1561 ntBASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AC009477.1-201ENST00000452936 217 ntBASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL27A1Q8IZC6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL27A1Q8IZC6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COL27A1Q8IZC6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 FAM220BP-201ENST00000377689 816 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms