Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 HLA-A-201ENST00000376802 1334 ntBASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 GPR89P-201ENST00000407924 1495 ntBASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CBWD2Q8IUF1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CBWD2Q8IUF1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
CBWD2Q8IUF1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CBWD2Q8IUF1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 FDX1P1-201ENST00000449115 551 ntBASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CBWD2Q8IUF1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBWD2Q8IUF1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AC026396.1-201ENST00000419388 421 ntBASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AL662844.1-201ENST00000546340 181 ntBASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AC105339.3-201ENST00000560043 636 ntBASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AP001005.1-201ENST00000571755 1248 ntBASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CBWD2Q8IUF1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms