Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.39■□□□□ 0.05
LRRC28Q86X40 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 AC116353.5-201ENST00000638148 1699 ntBASIC15.38■□□□□ 0.05
LRRC28Q86X40 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC28Q86X40 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC28Q86X40 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.37■□□□□ 0.05
LRRC28Q86X40 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 CYP2T1P-202ENST00000641596 2535 ntBASIC15.37■□□□□ 0.05
LRRC28Q86X40 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC28Q86X40 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC28Q86X40 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms